Digitize Me, Visualize Me, Search Me
Open Science and its Discontents
edited by Gary Hall
Introduction: White Noise: On the Limits of Openness (Living Book Mix)
One of the aims of the Living Books About Life series is to provide a 'bridge' or point of connection, translation, even interrogation and contestation, between the humanities and the sciences. Accordingly, this introduction to Digitize Me, Visualize Me, Search Me, a book in the series on open science, takes as its starting point the so-called ‘computational turn’ to data-intensive scholarship in the humanities.
The phrase ‘the computational turn’ has been adopted to refer to the process whereby techniques and methodologies drawn from computer science and related fields – including science visualization, interactive information visualization, image processing, network analysis, statistical data analysis, and the management, manipulation and mining of data – are being increasingly used to produce new ways of approaching and understanding texts in the humanities - what is sometimes thought of as 'the digital humanities'. (more...)
Open Science
It’s An Open (Science), Open (Access), Open (Source), Open (Notebook) World
- Patrick O. Brown, Michael B. Eisen, Harold Varmus
- Why PLoS Became a Publisher
- Sally Murray, Stephen Choi, John Hoey, Claire Kendall, James Maskalyk, and Anita Palepu
- Open Science, Open Access and Open Source Software at Open Medicine
Community Science
BioCurious: A Community Lab for Biotechnology
- Richard Stallman
- Free Community Science and the Free Development of Science
'This Revolution Will Be Digitized’: Online Tools for Open Science
- Chris Patil and Vivian Siegel
- This Revolution Will Be Digitized: Online Tools for Radical Collaboration
Open Science Publishing
- Philip E. Bourne
- What Do I Want from the Publisher of the Future?
Open Knowledge
Access to Knowledge
- Gaelle Krikorian and Amy Kapczynski, eds
- Access to Knowledge In the Age of Intellectual Property
New Models for Open Sharing and Open Research
- Anne H. Margulies
- A New Model for Open Sharing
- Thomas B. Kepler, Marc A. Marti-Renom, Stephen M. Maurer, Arti K. Rai, Ginger Taylor, Matthew H. Todd
- Open Source Research - The Power of Us
Open Knowledge and its Discontents
- Michael Gurstein
- Are the Open Data Warriors Fighting for Robin Hood or the Sheriff?: Some Reflections on OKCon 2011 and the Emerging Data Divide
Open Data
Data-Intensive Science
- Vincent S. Smith
- Data Publication: Towards a Database of Everything
- Tony Hey, Stewart Tansley, Kristen Tolle, eds
- Scholarly Communication, The Fourth Paradigm: Data-Intensive Scientific Discovery
World of Data
We Can Know It For You
- Daniel Chandramohan, Kenji Shibuya, Philip Setel, Sandy Cairncross, Alan D. Lopez, Christopher J. L. Murray, Basia Żaba, Robert W. Snow, Fred Binka
- Should Data from Demographic Surveillance Systems Be Made More Widely Available to Researchers?
Digitize Me
Encode Me/Decode Me
- The ENCODE Project Consortium
- A User's Guide to the Encyclopaedia of DNA Elements (ENCODE)
Life-Tracking
- Gary Wolf
- The Data-Driven Life
- Aiden R. Doherty and Alan F. Smeaton
- Automatically Augmenting Lifelog Events Using Pervasively Generated Content from Millions of People
- Jennifer S. Beaudin, Stephen S. Intille, and Margaret E. Morris
- To Track or Not to Track: User Reactions to Concepts in Longitudinal Health Monitoring
The Neurological Turn: or, ‘How the Internet Gets Inside Us'
- Adam Gopnik
- The Information: How the Internet Gets Inside Us
- N. Katherine Hayles
- Hyper and Deep Attention: The Generation Divide in Cognitive Modes
Visualize Me
What is Visualization?
- Lev Manovich
- What is Visualization?
Mood-mapping
- Celeste Biever
- Twitter Mood Maps Reveal Emotional States of America
The Visualized Human (or, The Human As Spectacle)
- Nicholas Felton
- The Annual Felton Report
- Deb Roy
- The Birth of a Word
Search Me
Search-Engine Science
- Emily H. Chan, Vikram Sahai, Corrie Conrad, and John S. Brownstein
- Using Web Search Query Data to Monitor Dengue Epidemics: A New Model for Neglected Tropical Disease Surveillance
- Annie Y.S. Lau, Enrico Coiera, Tatjana Zrimec, and Paul Compton
- Clinician Search Behaviors May Be Influenced by Search Engine Design
The Science of Control
- Alession Signorini Alberto Maria Segre, Philip M. Polgreen
- The Use of Twitter to Track Levels of Disease Activity and Public Concern in the U.S. During the Influenza A H1N1 Pandemic
- David Parry
- Surveillance
- Felix Stalder and Christine Mayer
- The Second Index: Search Engines, Personalization and Surveillance (Deep Search)
Deep Search
- Michael K. Bergman
- The Deep Web: Surfacing Hidden Value
- Clare Birchall
- The Invisible Web, The In/Visible
Media Gifts?
Appendix
- Karl Popper, The Open Society and its Enemies
- Attributions